Package: polyBreedR 0.44

Jeffrey Endelman

polyBreedR: Genomics-assisted breeding for polyploids (and diploids)

Genomics-assisted breeding for polyploids (and diploids)

Authors:Jeffrey B. Endelman

polyBreedR_0.44.tar.gz
polyBreedR_0.44.zip(r-4.5)polyBreedR_0.44.zip(r-4.4)polyBreedR_0.44.zip(r-4.3)
polyBreedR_0.44.tgz(r-4.4-any)polyBreedR_0.44.tgz(r-4.3-any)
polyBreedR_0.44.tar.gz(r-4.5-noble)polyBreedR_0.44.tar.gz(r-4.4-noble)
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polyBreedR.pdf |polyBreedR.html
polyBreedR/json (API)
NEWS

# Install polyBreedR in R:
install.packages('polyBreedR', repos = c('https://polyploids.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/jendelman/polybreedr/issues

On CRAN:

21 exports 7 stars 1.64 score 70 dependencies

Last updated 18 days agofrom:f998169d1ce37c79e3f70189f764de1a228e45cf

Exports:A_matADsplitarray2vcfcheck_ploidycheck_triodart2vcfG_matgbsgeno_callget_pedigreeGT2DSGvsAimputeimpute_L2Himpute_LAmadcmerge_imputereadXYupdate_aliasvcf2csvwrite_vcf

Dependencies:AGHmatrixapeassertthatcliclustercodetoolscolorspacecpp11data.tabledigestdoFuturedoRNGdplyrfansifarverforeachfuturefuture.applygenericsggplot2ggrepelglobalsgluegtableHaploSimisobanditeratorslabelinglatticelifecyclelistenvmagrittrMASSMatrixmemusemgcvmunsellnlmeparallellypedigreepermutepillarpinfsc50pkgconfigplyrpurrrR6randomForestRColorBrewerRcppRcppArmadilloreshapereshape2rlangrngtoolsrrBLUPscalesstringistringrtibbletidyrtidyselectupdogutf8vcfRvctrsveganviridisLitewithrzoo