No datasets match
  1. 1.
    diaQTL::F1codes
    Genotype codes for F1 populations
    csv| xlsx| json| ndjson| rda| rds
    data.frame|100 x 2
  2. 2.
    diaQTL::S1codes
    Genotype codes for S1 populations
    csv| xlsx| json| ndjson| rda| rds
    data.frame|35 x 2
  3. 3.
    fitPoly::fitPoly_data
    Small fitPoly input datasets for testing and examples
    json| rda| rds
    list
  4. 4.
    fitPoly::scores
    A data set with dosage scores generated by fitPoly
    csv| xlsx| json| ndjson| rda| rds
    data.frame|17013 x 12
  5. 5.
    fitPoly::XYdat
    A data set containing SNP array data
    csv| xlsx| json| ndjson| rda| rds
    data.frame|17808 x 6
  6. 6.
    mappoly::hexafake
    Simulated autohexaploid dataset.
    rda| rds
    mappoly.data
  7. 7.
    mappoly::hexafake.geno.dist
    Simulated autohexaploid dataset with genotype probabilities.
    rda| rds
    mappoly.data
  8. 8.
    mappoly::maps.hexafake
    Resulting maps from 'hexafake'
    rda| rds
    list
  9. 9.
    mappoly::solcap.dose.map
    Resulting maps from 'tetra.solcap'
    rda| rds
    list
  10. 10.
    mappoly::solcap.err.map
    Resulting maps from 'tetra.solcap'
    rda| rds
    list
  11. 11.
    mappoly::solcap.mds.map
    Resulting maps from 'tetra.solcap'
    rda| rds
    list
  12. 12.
    mappoly::solcap.prior.map
    Resulting maps from 'tetra.solcap.geno.dist'
    rda| rds
    list
  13. 13.
    mappoly::tetra.solcap
    Autotetraploid potato dataset.
    rda| rds
    mappoly.data
  14. 14.
    mappoly::tetra.solcap.geno.dist
    Autotetraploid potato dataset with genotype probabilities.
    rda| rds
    mappoly.data
  15. 15.
    PolyHaplotyper::demo_ped
    pedigree
    csv| xlsx| json| ndjson| rda| rds
    data.frame|661 x 4
  16. 16.
    PolyHaplotyper::demo_snpdos
    dosages of SNP alleles
    csv| xlsx| json| ndjson| rda| rds
    data.frame|30 x 0
  17. 17.
    PolyHaplotyper::phblocks
    List of markers per haploblock
    csv| json| rda| rds
    list
  18. 18.
    PolyHaplotyper::phdos
    dosages of SNP alleles
    csv| json| rda| rds
    matrix|8 x 0
  19. 19.
    PolyHaplotyper::phFS
    members of FS families
    json| rda| rds
    list
  20. 20.
    PolyHaplotyper::phpar
    parents of FS families
    csv| json| rda| rds
    matrix|4 x 0
  21. 21.
    PolyHaplotyper::phped
    pedigree
    csv| xlsx| json| ndjson| rda| rds
    data.frame|661 x 3
  22. 22.
    PolyHaplotyper::phresults
    haplotyping results
    csv| json| rda| rds
    list
  23. 23.
    polymapR::ALL_dosages
    A dosage matrix for a random pairing tetraploid with five linkage groups.
    csv| json| rda| rds
    matrix|3000 x 0
  24. 24.
    polymapR::all_linkages_list_P1
    A (nested) list of linkage data frames classified per linkage group and homologue
    json| rda| rds
    list
  25. 25.
    polymapR::all_linkages_list_P1_split
    A (nested) list of linkage data frames classified per linkage group and homologue
    json| rda| rds
    list
  26. 26.
    polymapR::all_linkages_list_P1_subset
    A (nested) list of linkage data frames classified per linkage group and homologue
    json| rda| rds
    list
  27. 27.
    polymapR::chk1
    Example output of the checkF1 function
    json| rda| rds
    list
  28. 28.
    polymapR::exampleRAD_mapping
    Example output dataset of polyRAD::PipelineMapping2Parents function
    rda| rds
    RADdata
  29. 29.
    polymapR::gp_df
    An example of a genotype probability data frame
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10800 x 12
  30. 30.
    polymapR::gp_vignette_data
    A list of objects needed to build the probabilistic genotype vignette
    json| rda| rds
    list
  31. 31.
    polymapR::integrated.maplist
    A nested list with integrated maps
    json| rda| rds
    list
  32. 32.
    polymapR::LGHomDf_P1_1
    A 'data.frame' specifying the assigned homologue and linkage group number per SxN marker
    csv| xlsx| json| ndjson| rda| rds
    data.frame|172 x 3
  33. 33.
    polymapR::LGHomDf_P2_1
    A 'data.frame' specifying the assigned homologue and linkage group number per SxN marker
    csv| xlsx| json| ndjson| rda| rds
    data.frame|195 x 3
  34. 34.
    polymapR::LGHomDf_P2_2
    A 'data.frame' specifying the assigned homologue and linkage group number per SxN marker
    csv| xlsx| json| ndjson| rda| rds
    data.frame|195 x 3
  35. 35.
    polymapR::map1
    A sample map
    csv| xlsx| json| ndjson| rda| rds
    data.frame|100 x 2
  36. 36.
    polymapR::map2
    A sample map
    csv| xlsx| json| ndjson| rda| rds
    data.frame|100 x 2
  37. 37.
    polymapR::map3
    A sample map
    csv| xlsx| json| ndjson| rda| rds
    data.frame|60 x 2
  38. 38.
    polymapR::maplist_P1
    A list of maps of one parent
    json| rda| rds
    list
  39. 39.
    polymapR::maplist_P1_subset
    A list of maps of one parent
    json| rda| rds
    list
  40. 40.
    polymapR::maplist_P2_subset
    A list of maps of one parent
    json| rda| rds
    list
  41. 41.
    polymapR::marker_assignments_P1
    A 'data.frame' with marker assignments
    csv| json| rda| rds
    matrix|1094 x 16
  42. 42.
    polymapR::marker_assignments_P2
    A 'data.frame' with marker assignments
    csv| json| rda| rds
    matrix|1127 x 16
  43. 43.
    polymapR::mout
    Example output dataset of updog::multidog function
    rda| rds
    multidog
  44. 44.
    polymapR::P1_DxN_Assigned
    A 'data.frame' with marker assignments
    csv| json| rda| rds
    matrix|111 x 14
  45. 45.
    polymapR::P1_homologues
    A list of cluster stacks at different LOD scores
    json| rda| rds
    list
  46. 46.
    polymapR::P1_SxS_Assigned
    A 'data.frame' with marker assignments
    csv| json| rda| rds
    matrix|297 x 14
  47. 47.
    polymapR::P2_DxN_Assigned
    A 'data.frame' with marker assignments
    csv| json| rda| rds
    matrix|101 x 14
  48. 48.
    polymapR::P2_homologues
    A list of cluster stacks at different LOD scores
    json| rda| rds
    list
  49. 49.
    polymapR::P2_homologues_triploid
    A list of cluster stacks at different LOD scores
    json| rda| rds
    list
  50. 50.
    polymapR::P2_SxS_Assigned
    A 'data.frame' with marker assignments
    csv| json| rda| rds
    matrix|301 x 14
  51. 51.
    polymapR::P2_SxS_Assigned_2
    A 'data.frame' with marker assignments
    csv| json| rda| rds
    matrix|301 x 14
  52. 52.
    polymapR::phased.maplist
    A list of phased maps
    json| rda| rds
    list
  53. 53.
    polymapR::screened_data
    A dosage matrix for a random pairing tetraploid with five linkage groups.
    csv| json| rda| rds
    matrix|1417 x 0
  54. 54.
    polymapR::screened_data2
    A dosage matrix for a random pairing tetraploid with five linkage groups.
    csv| json| rda| rds
    matrix|1417 x 0
  55. 55.
    polymapR::screened_data3
    A dosage matrix for a random pairing tetraploid with five linkage groups.
    csv| json| rda| rds
    matrix|1417 x 0
  56. 56.
    polymapR::segregating_data
    A dosage matrix for a random pairing tetraploid with five linkage groups.
    csv| json| rda| rds
    matrix|2873 x 0
  57. 57.
    polymapR::SN_DN_P1
    A linkage 'data.frame'.
    csv| xlsx| json| ndjson| rda| rds
    linkage_df|19536 x 5
  58. 58.
    polymapR::SN_DN_P2
    A linkage 'data.frame'.
    csv| xlsx| json| ndjson| rda| rds
    linkage_df|19897 x 5
  59. 59.
    polymapR::SN_SN_P1
    A linkage 'data.frame'.
    csv| xlsx| json| ndjson| rda| rds
    linkage_df|15400 x 5
  60. 60.
    polymapR::SN_SN_P2
    A linkage 'data.frame'.
    csv| xlsx| json| ndjson| rda| rds
    linkage_df|19306 x 5
  61. 61.
    polymapR::SN_SN_P2_triploid
    A linkage 'data.frame'.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|6655 x 5
  62. 62.
    polymapR::SN_SS_P1
    A linkage 'data.frame'.
    csv| xlsx| json| ndjson| rda| rds
    linkage_df|53152 x 5
  63. 63.
    polymapR::SN_SS_P2
    A linkage 'data.frame'.
    csv| xlsx| json| ndjson| rda| rds
    linkage_df|59494 x 5
  64. 64.
    polymapR::TRI_dosages
    A dosage matrix for a random pairing tetraploid with five linkage groups.
    csv| json| rda| rds
    matrix|250 x 0
  65. 65.
    polyqtlR::BLUEs.pheno
    Best Linear Unbiased Estimates of phenotype
    csv| xlsx| json| ndjson| rda| rds
    data.frame|50 x 2
  66. 66.
    polyqtlR::GIC_4x
    Genotypic Information Coefficient for example tetraploid
    json| rda| rds
    list
  67. 67.
    polyqtlR::IBD_4x
    Identical by descent probabilities for example tetraploid
    json| rda| rds
    list
  68. 68.
    polyqtlR::mr.ls
    Example output of meiosis report function
    csv| json| rda| rds
    list
  69. 69.
    polyqtlR::phased_maplist.4x
    Phased maplist for example tetraploid
    csv| json| rda| rds
    list
  70. 70.
    polyqtlR::Phenotypes_4x
    Phenotypes for example tetraploid
    csv| xlsx| json| ndjson| rda| rds
    data.frame|150 x 3
  71. 71.
    polyqtlR::qtl_LODs.4x
    QTL output for example tetraploid
    json| rda| rds
    list
  72. 72.
    polyqtlR::Rec_Data_4x
    Recombination data for example tetraploid
    json| rda| rds
    list
  73. 73.
    polyqtlR::segList_2x
    Expected segregation for all markers types of a diploid cross
    csv| json| rda| rds
    list
  74. 74.
    polyqtlR::segList_3x
    Expected segregation for all markers types of a triploid cross (4 x 2)
    csv| json| rda| rds
    list
  75. 75.
    polyqtlR::segList_3x_24
    Expected segregation for all markers types of a triploid cross (2 x 4)
    csv| json| rda| rds
    list
  76. 76.
    polyqtlR::segList_4x
    Expected segregation for all markers types of a tetraploid cross
    json| rda| rds
    list
  77. 77.
    polyqtlR::segList_6x
    Expected segregation for all markers types of a hexaploid cross
    json| rda| rds
    list
  78. 78.
    polyqtlR::SNP_dosages.4x
    SNP marker dosage data for example tetraploid
    csv| json| rda| rds
    matrix|186 x 52
  79. 79.
    polyRAD::exampleRAD
    Miniature Datasets for Testing polyRAD Functions
    rda| rds
    RADdata
  80. 80.
    polyRAD::exampleRAD_mapping
    Miniature Datasets for Testing polyRAD Functions
    rda| rds
    RADdata
  81. 81.
    polyRAD::Msi01genes
    Miniature Datasets for Testing polyRAD Functions
    rda| rds
    RADdata
  82. 82.
    qtlpoly::B2721
    Autotetraploid potato dataset
    rda| rds
    mappoly.data
  83. 83.
    qtlpoly::hexafake
    Simulated autohexaploid dataset.
    rda| rds
    mappoly.data
  84. 84.
    qtlpoly::maps4x
    Autotetraploid potato map
    rda| rds
    list
  85. 85.
    qtlpoly::maps6x
    Simulated autohexaploid map
    rda| rds
    list
  86. 86.
    qtlpoly::pheno4x
    Autotetraploid potato phenotypes
    csv| xlsx| json| ndjson| rda| rds
    data.frame|143 x 3
  87. 87.
    qtlpoly::pheno6x
    Simulated phenotypes
    csv| xlsx| json| ndjson| rda| rds
    data.frame|300 x 3
  88. 88.
    updog::snpdat
    GBS data from Shirasawa et al (2017)
    csv| xlsx| json| ndjson| rda| rds
    tbl_df|429 x 4
  89. 89.
    updog::uitdewilligen
    Subset of individuals and SNPs from Uitdewilligen et al (2013).
    json| rda| rds
    list