Package: fitPoly 3.0.0

Roeland E. Voorrips

fitPoly: Genotype Calling for Bi-Allelic Marker Assays

Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) <doi:10.1186/1471-2105-12-172>.

Authors:Roeland E. Voorrips and Gerrit Gort

fitPoly_3.0.0.tar.gz
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fitPoly_3.0.0.tgz(r-4.4-any)fitPoly_3.0.0.tgz(r-4.3-any)
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fitPoly.pdf |fitPoly.html✨
fitPoly/json (API)

# Install 'fitPoly' in R:
install.packages('fitPoly', repos = c('https://polyploids.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • fitPoly_data - Small fitPoly input datasets for testing and examples

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

4 exports 0.00 score 3 dependencies 155 downloads

Last updated 6 years agofrom:809343e5a4

Exports:CodomMarkerconvertStartmeansfitOneMarkersaveMarkerModels

Dependencies:codetoolsforeachiterators