Package: fitPoly 3.0.0
Roeland E. Voorrips
fitPoly: Genotype Calling for Bi-Allelic Marker Assays
Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) <doi:10.1186/1471-2105-12-172>.
Authors:
fitPoly_3.0.0.tar.gz
fitPoly_3.0.0.zip(r-4.5)fitPoly_3.0.0.zip(r-4.4)fitPoly_3.0.0.zip(r-4.3)
fitPoly_3.0.0.tgz(r-4.4-any)fitPoly_3.0.0.tgz(r-4.3-any)
fitPoly_3.0.0.tar.gz(r-4.5-noble)fitPoly_3.0.0.tar.gz(r-4.4-noble)
fitPoly_3.0.0.tgz(r-4.4-emscripten)fitPoly_3.0.0.tgz(r-4.3-emscripten)
fitPoly.pdf |fitPoly.html✨
fitPoly/json (API)
| # Install 'fitPoly' in R: |
| install.packages('fitPoly', repos = c('https://polyploids.r-universe.dev', 'https://cloud.r-project.org')) |
- fitPoly_data - Small fitPoly input datasets for testing and examples
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 7 years agofrom:809343e5a4. Checks:OK: 7. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-win | OK | Oct 30 2024 |
| R-4.5-linux | OK | Oct 30 2024 |
| R-4.4-win | OK | Oct 30 2024 |
| R-4.4-mac | OK | Oct 30 2024 |
| R-4.3-win | OK | Oct 30 2024 |
| R-4.3-mac | OK | Oct 30 2024 |
Exports:CodomMarkerconvertStartmeansfitOneMarkersaveMarkerModels
