Package: GWASpoly Title: Genome-wide Association Studies for Autopolyploids Version: 2.14 Author: Jeffrey B. Endelman, Umesh R. Rosyara Maintainer: Jeffrey Endelman Description: Designed for genome-wide association studies in autopolyploids. License: GPL-3 RoxygenNote: 7.3.2 Encoding: UTF-8 Imports: rrBLUP, methods, ggplot2, tidyr, stats, parallel, rlang, scam, Matrix Suggests: knitr, rmarkdown VignetteBuilder: knitr Collate: 'GWASpoly.data.R' 'GWASpoly.K.R' 'GWASpoly.R' 'GWASpoly.fitted.R' 'GWASpoly.thresh.R' 'Keff.R' 'LD.plot.R' 'VCF2dosage.R' 'design.score.R' 'fit.QTL.R' 'get.QTL.R' 'get_x.R' 'make.full.R' 'makeLOCO.R' 'manhattan.plot.R' 'qq.plot.R' 'qvalue.R' 'read.GWASpoly.R' 'score.calc.R' 'set.K.R' 'set.params.R' 'set.threshold.R' 'write.GWASpoly.R' Config/pak/sysreqs: libicu-dev Repository: https://polyploids.r-universe.dev Date/Publication: 2026-09-21 22:42:33 UTC RemoteUrl: https://github.com/jendelman/GWASpoly RemoteRef: HEAD RemoteSha: a23cab630c8462fc7f46abd6330a8b33eb8bd635 NeedsCompilation: no Packaged: 2026-10-22 06:29:37 UTC; root